YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38104410, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADFIKDLWE SIFTPGPTPS LLIATNVSFA ALQVVLFALL IATYSIHFVV LSGLCGGLWW  60
   61 AINWFAREVK EAQRLEQLEK QRQPPPALSS SDDETEVETT APGPRPRKTP PAPAASTTQA 120
  121 NPEDTKGELK HRAASTPLTG PSASAASSKS GVSTEDEWEK VSESEEKDQ

Type	Start	End	Confidence
Cytoplasmic	1	19	0.76
Transmembrane Helix	20	41	0.83
Non-Cytoplasmic	42	45	0.56
Transmembrane Helix	46	66	0.89
Cytoplasmic	67	169	0.93