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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38104335, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTARKSHSP LLCTSIAADP KAAENKPINS ISGLFSQLLV SSKAGSFKVV HNHSLTELIT  60
   61 GPIRKATSRT STPVQSPVAC HTTNSQTSPR SKSRGHRSSD DDSYRSDSLE RKARKEADKL 120
  121 ERRLQEQELI DARRRSEDLK AREHLDEATR ARFGDDVVFR ELTPIAQLVT LPVGSEITFR 180
  181 ARIHHQRDIS KALDFLLLRD QTHSIQGVLQ GPPEMVKWAQ RLHPESIVQI TGHLQCPREP 240
  241 VRSATHQGLE VLIDTIHLVA PAKNLSFNNY QPPESLHPRL TNRVVDLRHP ANQALFRVRA 300
  301 AVTRTFRWTL DQQDFVEIQT PKIMAGATES GAEVFKVNYF GRSAYLAQSP QLSKQMAISA 360
  361 DFKRVYEVGP VFRAENSNTH RHLTEYTGLD IEMCIDQSHH EIIRMVDRVL KNIFAAVHQM 420
  421 EELKIIRERW PSEDLVWLEE TPILTFPEAL QMLREDGNED IEEDDLSTRD EYRLGELVKE 480
  481 KYKTDYFILD KFPTIARPFY THKDDSDPKW TNSFDIFVRG QEICTGGQRI HKYDELRQSM 540
  541 TDSGISGDGM EEYLAAFESG APPHGGAGLG LERIITFMLQ LGDVRNAAPF HRDPKSLPSR 600
  601 PPGLPHPEAS TRRRKSATAP ASQNNKESLH GTESSDMTPK SSAETEYPPL EKLIANYGDA 660
  661 TNTSWLDDRF QIWRHSPTGA AVGYVRQAKD LVIMTGDPLC DPTQYAEIIG AYLDFVRNTL 720
  721 KCKPVWLLVS EEVQRILANE PHNWRTLTCN EEQRIPADDQ ARRGLSRPGA QRSARRVQRE 780
  781 GIRLHEVRPE KDENFKQRAN KAIDEWYRAR EGKKQVHLTE VRPWIDAEHR RYFAAERDGR 840
  841 VLSLVVLHRL APRYGWQVKW ALDMPSAPNG TIEALVDLAL MSISGSPATF GADVSGKLVP 900
  901 VAHIGGAKTK ILTKAYETFV KGTGISRKKD FRGKFGIVGE AVFICYPRGA MGMGEIREIY 960
  961 RVNLTTQKRL AASVLDCGKN KIWLDPNEVS EISNANSRQT IRKLVQDGLI IKKPVTMHSR1020
 1021 ARARELNLAR RIGRHRGFGK RKGTADARMP TQVVWMRRQR VLRRLLVKYR ASGKIDKHLY1080
 1081 HELYHSAKGN TFKHKRALVE HIHRAKAEKQ RERLLKDEMD AKRAKTKAAR ERKLERQAAK1140
 1141 RNALAGEAEE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle