YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6180007
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV SVSECIVKIP LRRVKTMRKT LSEKNMLNNF PKEHAYRLSQ ISFRGSNLTI  60
   61 HPLRNIMDLV YLGNITIGTP PQKFQVIFDT GSADLWVPSD FCAVQACSIH ARFRHLQSST 120
  121 FRPTNRTFSI TYGCGTVKGI VVHDTVRIGD LVSTDQLFGL STAEYGFKRI PFDGVLGLNY 180
  181 PNISYSGAIP IFDKLKNEGA ISEPVFAFYL SKDGQEGSVV MFGGVDHRYY KGEINWVPLI 240
  241 QAGNWMVHMD RISIERKVIA CSGGCHVIVD TGTAFIKGPK SLVDNMQKLI GARPRGSKYC 300
  301 VSCSAVNILP TIIFTINRIN YPVPGRAYII KDSRGCCYTT FKENQLSPST EIWILGEVFL 360
  361 RLYFSVFDRG NDRIGLARAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.95
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	380	0.99