YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6180005
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKIP LRRVKTMRKN PSGKNMMNNF LKEHAYRLSQ ISFRGLNLTH  60
   61 PLSNYIDMLY MGNITIGTPP QEFQVVFDTG SSDLWVPSSF CTILACATQA RFRHLQSSTF 120
  121 RLTNRTFRIT YGSGGLKGVV AHDTVRIGNL VSTDQPFGLT LKEYGFAHIT FDGVLGLNYP 180
  181 NISYSGAIPI FDKLKNEGAI SEPVFAFYLS KDEQEGSVVM FGGVDHRYYK GELNWIPLTK 240
  241 AGDWSVRVDR ITMRGEVIAC ADGCTALLDT GSSLIQGPGR LVDNVQNLIG TMPQGSTHYV 300
  301 PCSVVNILPP IIFTINGINY PVPGRAYILK DSRGRCYTNF KKKTLRTSTE SWVLGEPFLR 360
  361 LYFSVFDRGN DRIGLARAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.94
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	379	0.99