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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39944902, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPSRFSWR RANIDPAQAN DISTTSNNND SPTAGLISPP NGPGETRDRS LSFGSASYRE  60
   61 PIRSFIHGSM RDRYTPVDSA QHARSVREDT AELASYLLSD QNNRRPPSFL NRPRSSSSRF 120
  121 SRDAPQVFSP AAVEDEALSP AKDTEIIEEI SEPPSPEPVE EGEDFNGAGP SILANMLRRS 180
  181 PPEDNLKDLD RQPPGDLHIG AMSPGLRDYG SLHKKQDLHE QERENNMSET TPLLGVRPRQ 240
  241 SIRLNGTSLT SDLESQKVAD PPKSGFLHGL AGVRHSLESH VSAFFRVARE PKCWDKRAIW 300
  301 QAAVVDPVAC LPAVIVGLLL NILDALSYGM ILFPLGNPIF SNLGPAGISI FYVSTIVSQL 360
  361 TYSMGSIFKG SVGSEMIEVV PFFHSMASTI TTSIGQDDPD AVIATTIVAY AVSSMMTGIV 420
  421 FFLMGYFKFG YIVGFIPRHI LIGCIGGVGW FLVATGFEVS ARIEGSLEYD LATLNKLINP 480
  481 ETIPLWATPL ALAVALVYLQ KKIKSTYFLP CFILMIPIVF YIFVFSLDSL NPESLRESGW 540
  541 IFEGAASDEP WWYFYTLYKF HLVRWDVLAE TIPAMLALTF FGILHVPINV PALAMSAGED 600
  601 NVDLNHELKL HGYSNFLSGL TGSIQNYLVY ANTVMFMRSG ANSRLAGFEL AALTFGVLLV 660
  661 GPRLIGIIPV MMVGCLIFVL GFELLSEALW HPRKKLKTLE YLTVVAIILI MGIYDFVIGI 720
  721 GCGILIAFVT LVFQTSQVSA VRAGWSGDVV GSTVRRNPSQ QNYLKQVGSQ IHVVKLSGYL 780
  781 FFGTIVGVEE KIREIIADET FRQRPIRFLV VDLHHVAGCD YSAGEAFGTL SRLLKKKNIE 840
  841 FILSGVDDDG ALSHSLRTVG IGEEVATVLP DLNSALESCE NELLKTLYAR QEDASRNPPT 900
  901 PASANLDVPG QQHTDSASQG PLDMLASSPR RSHLWEAAMQ AVNAGLTRQN KWAAFGEPLR 960
  961 LLLQIFSDLS DKNEDFWFRA VPFFAAKRYA AGDVLYRQGE PAEGFYLLES GIVRMEYDLP1020
 1021 QGRLCESIVA GTTCGELPFF SDTCRTATAV VERDAVVWLI DREAWAKLQR KEPDVAQELL1080
 1081 RMGLKITSER MNAMTSHVLT LAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle