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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39943980, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRITRLIFG HVVLINVTPS IPIPMRNSNP SRSTVPVQYV RHGGLGGGRV PRYEVFGLCN  60
   61 TPQHTKMSSP QDRAQYYIGQ LDRELSKYPA LNNLERTTGV PKAYAVVGVV VLYFFLIVFN 120
  121 LGGQLLTNIA GFGIPAYYSL DALFSANKED DTQWLTYWVV FAMFTVVESL VSVVYWFPFY 180
  181 YMFKFVFLLW LSLPAFKGAD IIFRSFLAPT LSRYFVHSRP ASSNLRAKAD SAGKAEYSNR 240
  241 EVFDESIVMG LRIVLNQTNS VGPSKPRRFE TSSARTHVLA MRLTFIQSRL AASLGVAASL 300
  301 LPLHLAFAQE LSGEGRDTHN DALKPRLAPG YEPVFSSIDR TIIGRAPAGV TPLDNNIPRR 360
  361 LELQPGSTQF LVFERPGEVR TELRRDIGGT QDLPQENGLF EDAAASSGDL DRRQAPTRSV 420
  421 YISATTCQQP QVKADATAPE IPQLTLFIST KNLRDLTQNG NSSDPNMTWR IFDEGAAMFN 480
  481 ITTSENVFVG IQAPALPNTI SGSWGFEVAA STDQPYHGHS SIETRDLMWM DSDASGALMV 540
  541 TRTASGLSEG DQGPYELFAS RADGKNRTLS GIRNSYCGLQ NYAEISATKG GEQSVLVRSS 600
  601 LVKRATGNMA KQQFHLTGLQ AGTVYDGIIA TKQRANLPGG GGLVFRSTQF TTRQVENSSC 660
  661 MLVSGLAFCD KVAYKVPANT TAFPNPEALG KAYDDQAKEI YDSFEIQIAQ VQCETENAQI 720
  721 YSLARTCDDC RAAYKDWLCS VSIPRCEEVT ENKGWLHNRN FDNSDGQLET FEASSRNSFV 780
  781 NEAIVPRPYK ELLPCDELCY DLVQSCPNSM GFVCPTPQSK YGFNHSYHIR EQDEASGEFK 840
  841 CNFPDNAHFI GVRKSAAGTF RALAGSDRFL SHSVVMYGIV TALGLALM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle