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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38103285, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLFAFLLF PLLAAAQYHE QLVLRPLPLS ALLASFNFRA NTTIADFEAH NYRLFPRSLA  60
   61 QILQHAGTRE LHLRFGLGRW DAESWGARPW DGTREGGTGV ELWAWLDAST DEEADRKWLT 120
  121 LTNALSGLFC ASLNFIDGTR TTRPVMSFQP EGDHPNVTAA NMHLLYGTLP REVVCTENLT 180
  181 PFLKLLPCKG KAGIASLLDG HKLFDASWQS MAIDVRPVCS EDGGCVLEIE QTIDMVLDLD 240
  241 RAKRPRDNPI PRPPPSEELK CDTTKEYHNE HTCFPADYTA HQDWTLSKVF GRSMQGSCPL 300
  301 ANSDVPPVCM QIPESRSVYT SEGVHEIKNP DGRSRCFKVD DGALVELVLA EPSQESSAHP 360
  361 ESPGADFESR GLLKPEVPAL YAERSLTGHG AERGGVQTIF TNPSPDKEIE FVYMESLPWF 420
  421 MRIYLHTLTA RVADSEIDSR GSTVSAGQAQ AKGDKKVIQE IYYRPALDRA RGSQVEVRMR 480
  481 VPPASTVFLT YDFEKSILRY TEYPPDANRG FDVASAVVTI LNSNQSSSTS SRNANLRTAS 540
  541 VLLSLPTPDF SMPYNVIILS STAIALGFGG LFNILVRRFV GADEGPRPGL ANGLARLKQK 600
  601 IKGKFGANKT PGKDDAPTLA SAGDQGADGS KQQALT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle