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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38102894, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFGAPAAS TSAPAAPSLF GAPAAGASAP APSSLFGSTQ QQQPASSGLF GAQPDQKRPA  60
   61 PGGGSLFGTT NSGAAQPAAS QNSQLIGLDG KPSSSPFATA IPQTKPTSSL FNNTATNAAG 120
  121 ASMFDSSIAR PAGAQSVNGS QAGGALFDSL LAKAKKNGDG GDGVEYLPSI QLGLSDLQQR 180
  181 LRKLGPQGRA ADRPPLDGRA HYLLAASGVD PGAAVKDLGD FAARAGGRVP ETRPLAPSPG 240
  241 ELDVETYLSN LQAKTTLSMI ADGLERSVRD FDSFLEENVN MEWEAQRRRI YDHFGIKPRE 300
  301 DAAGPKRSSV STGRDDVGGF GRSKRSRNAT GGAEAPGRAT QRNSTFGKSG MLRSVIGSPS 360
  361 RIGSHGAQFV DVEMVGHNGL GTGIPSINER FLDDKQRQFI EKIHSLNDSR LMNLSYPIMH 420
  421 EFADVTKRSG DVHAPKIYEA YNAMIEVIGE DPDADPNVPG STTRQRQFAQ SYIHAQSRSP 480
  481 EASELRKRII NGANRYLEKQ AFQEAEATIA KSPQEANLGG RPDVISKIRA YIRVLAAKKN 540
  541 LVTENADLQQ VQGEYVWAIV FYLLRTGHVN EAAMYVNENQ NHFRSIDRTF SSYINSYATS 600
  601 EDRRLKRPMQ ERCNNEYTQR VRNAPEGSID PYRMACYKIV GRCELSNRSL EGLRFGIDDW 660
  661 IWLQFNLARE GDRTTELANE TYGLADLQAN IQEIGNKHFA AKSGAAGDDV NGSFSMFFFL 720
  721 QILAGMYEAA VAYLYSFSRT DAVHFAIALE YYGLLRPADA MSVANELKSF NTKGVMQINF 780
  781 APLVGLYTQD FRAADVAAAV DYIVLICLNM DDPNNEADRQ QAALCHEGLR ALVLETREFS 840
  841 KLIGDIRPDG QRIRGMIEER GKLVALDDEA DFLRTISLEA ARAAEDSGRT TDAVLLNHLA 900
  901 GDYDAVIVLV SRTLSESISM DGGLDGDNEP LRLAPVKPRV EGVEAQEQAG TSLSLAAIDD 960
  961 PVELARTMLT MYERDIMFRR KIREPNRAAC AVLLQMSEIK GLIQAQQWPD ALDKIRSIDI1020
 1021 LPLDAKGDPS AIRSYAALFA GLSQAVASNV PNLVMWTTEC CTRQRERLAS GQFTGNEATA1080
 1081 RMLYNELRQI TVDLTTYTSQ LRYRFPPAIL EALAKAAAD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle