YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39973459, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNENNQDP YYWRPDPKAL HSEPLTTNSR IAAICGVTTV GVFVASSHAT QHSINTQNPF  60
   61 PETPPNTRFA MSNPLDAEPG TELFASYEAE LKLVQADLSQ KLDSIPDLTG EPRKAALSQA 120
  121 SRALEEADEL LGQMRLEKQK NIPSSSRARV NQRFRNYETD VDAVRRRLDA LASDRSALFG 180
  181 GRYQDNPSGS GGASASDVQL EQREQLLRGT DRLDRSSRRL KDSHALALET EAIGASTLRD 240
  241 LAHQRSQIQH TTEVLVQSEG YVDRSVKTLR GMARRMATNR IITIAIITVL VMLILAVIVS 300
  301 KFR

Type	Start	End	Confidence
Cytoplasmic	1	276	0.83
Transmembrane Helix	277	299	0.90
Non-Cytoplasmic	300	303	0.70