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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38102498, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLETKELA LAALGSFVAW GYATHWFPPL RLAGYAFVAG AVLAVLSLAA LVLLTSRGAQ  60
   61 YRTHTTSSRR PHGVAFVAPA AWPAELAALE SRQSYDPDPI APDTPKVSEA VEEVLGYIVR 120
  121 DFVQSWYGSI SKNPVFTNEV DRAIRAALGN IRDRILQVDL AEVLTSRLVP ILTAHFRGFY 180
  181 DAERAVRGKK LNRSVTETDE LDLAIAAKYN DGKLHPAAAL SHMDAKTTQQ EYLRDVVAKL 240
  241 LPKVLPENMS RSRAVTTLVR EIVACAVLGS VMQILSDPDT WNQVMENYGR SMLQDRSTVR 300
  301 KLRAALDQHA SPAPRTSKPV AFPRLSPGDS ERRFEKFVRS VRKVSNLSDA RRFRSEVASQ 360
  361 LKRESQKEGQ DPVHLRRLEM GKRLLDQRVQ QLAAAGGDRR AAQVPMPSQA PPRASRLENA 420
  421 SLEELLRDSS GLSYFMEYMD RQRLLPLVQF WLVVDGFRNP LEDDGPEDEQ LPLVLPPWNN 480
  481 SDRLDLAQIN QAYLSMPVLK VPPSSRKLVQ EFLDAGSKAI PAQYYRARRA ILRAQTAVLD 540
  541 EMRINHFQNF KKSDLFYKCL AAEEAASRIA APYTPAPAGQ TLTAAPTPTS PALNRASQSF 600
  601 TTARPNHATR LANRLNPVPN RRTGSTSDLR SLTVNGSGLD PLTSSRRSLD EGNSSPLFGD 660
  661 EEDWDNEALA DSVQSLDQEP MTAPPPDTRV VKAVEDALST IMEDSQPPTA EDLRASLFSG 720
  721 EDSSSGIFSP ETESLRGSAR GSLDISRPGQ PAKEVEKPSL SSLGLVSAAS RIGVFEDNDL 780
  781 FADEDKHLSD EREDLDGGGE DDDIDEVHEA APGDLGLAEA ITALSNDIDK LVAQEAIVES 840
  841 LQRKAELTNN TAELRILRKS KASLQREIRR KELQRQQYVI QESDNSLYGR STIKITGIQV 900
  901 GRDDDGKEYA LYAIEVSRDA GEKMPAATWV VTRRYSEFLE LHQKLRSRYP SVRNLDFPRR 960
  961 RMVMKLQSEF LQKRRDALEK YMRELLLLPE ACRSRDLRAF LSQTGVSGAG AAGRDLVDRE1020
 1021 DKKDMMTRLY DSVADGMEDI LGSIPVLDQL SLAGQNLIAA ATSQLNNTVP LGGGSGGVVG1080
 1081 ADEGGMSAAE AEAELNAFEN KELEPFVKPI CDVFLEVFEL NRGNNWLRGR AVVVVLHQLL1140
 1141 GGTIERKLRD NVRLLVQQDA VLKYVGLVRE SMWPGGCSAT QRPAKAPRTP AQKSRTRTEA1200
 1201 SLMLATLVPD LAGSVVGRLN AQAASRRIFA TLNNQRLNTH LVYTFLDEII DILFGEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle