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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1930136
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKVAEFLANM PDPTQDEVRG DEEEGERKPL ESALPSEDLT DLKELTEESD LLSDIFGLDL  60
   61 KREGGQYKLI PHNPNAGLSD LMTNPIPVPE VQEKFQEQKV KEEKEGKEET KSEPEKAEGE 120
  121 DGEKEEKAKD DKGKQKLRQL HTHRYGEPEV PESAFWKKII AYQQKLLNYF ARNFYNMRML 180
  181 ALFVAFAINF ILLFYKVSTS SVVEGKELPT RTSSDAAKVT TSLDSSPHRI IAVHYVLEES 240
  241 SGYMEPTLRI LAILHTIISF FCIIGYYCLK VPLVIFKREK EVARKLEFDG LYITEQPSED 300
  301 DIKGQWDRLV INTQSFPNNY WDKFVKRKVM DKYGEFYGRD RISELLGMDK AALDFSDARE 360
  361 KKKPKKDSSL SAVLNSIDVK YQMWKLGVVF TDNSFLYLAW YMTMSVLGHY NNFFFAAHLL 420
  421 DIAMGFKTLR TILSSVTHNG KQLVLTVGLL AVVVYLYTVV AFNLFRKFYN KSEDGDTPDM 480
  481 KCDDMLTCYM FHMYVGVRAG GGIGDEIEDP AGDEYEIYRI IFDITFFFFV IVILLAIIQG 540
  541 LIIDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle