YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38102386, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSLLSAHL EQIAISCQGI NELPFPPPKI FTNALLASDD ITSLIRDTET HERALFSVPP  60
   61 PPPQQQQQQP RRTPALEDDP DARGKTKRRQ TVFNVAAGEV TTGPPPGHRN AVSARRNTAV 120
  121 AAVLGGDLHG QITRGSHGGG EVDIEVLLRG AEKLCHVYPL PGALERIPEM RQKYAHQRNT 180
  181 LAYYEARVAE QTSRLERMNR DRYADEDDTQ DVEEAEDQGD NDGLTEEDLR REEEEVRELD 240
  241 TKKKELQQRL KAMDKDLVIP WNQISNVFNT GQYSSGIELA PKRRVGCRSR AACTLFSPGE 300
  301 LFQEGRDLLR ATNLVLVVDD KVRHARDALA VCVVHLDVNL GAALARLQPL PRLLGIQPAD 360
  361 LGGLGQHVEA GDVAPLLKVR LEDGLDNLVL ALRPFGLGQL QQPVRVARVA QHARKGKVYS 420
  421 LPLARGGEAG VQHGHAIGAE LADHVLGRRR GRLGQRRVQV EGVPRHSEGV VGATRDRLFV 480
  481 DIYGFFKTAL AHEALWWLGG VSLFFSCSFV GAGRKVLRPF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle