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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39974669, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVVSRWFT ILTVIPEDDA EEPPRSGRWT PPAEPEYNAD TPPPSPPLPS FAPGGLPVVK  60
   61 KRFRQKPDPL HVQIPQSYTS PTSLRNRYSS AVTSRIDRAD NAKFIEQFRY TVVASQLLSG 120
  121 HSILGAQHTL SGQGQEQVSG TGAGTPVVGE GLVLTVAGAF ALAWIISWVR AGGFSHLTKQ 180
  181 KLVVGLIVLL VFALVGHFLI RHRWQKYLRE KTLTELNTFV STSQHFDSAI SAAVSLIQEV 240
  241 ELVSRGYRIS APLPPVSRMD EKSQTRRCMR LRKALKACFG HCVPEYKQTM EVVKKFAAES 300
  301 DLEKYHDVYD LSDLDIADAL QGFSTESMED MESLHSFKIA AARLYTLRKM LLCALLALEV 360
  361 TGDNSDFLRW TTVVEGLRNL NETTSVSYMR VADILKDEES FPVIPTPKLP LSPGRERWRS 420
  421 QMRKLDSLSS GIRGLQAKMT LLREESDRAL NEAEDVSEIG PSLMSQYDSI GQDLKILTQA 480
  481 WEEGRAALAS GIDRNEKRLS SISNLLLSPT ISLSGLTTVD EGGVAEALEA LNGGSGSPCP 540
  541 NRKMSSPEAE VFEAIAMPRP RSLLTREERL AKMKADREKK AESRKSLENG RFMLRELETV 600
  601 LNVKNEQKSG VQHRKSASLG RTSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle