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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38101805, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMTQTVVSA LGQAQNSASS IAPNRHDPTT AAGSTPREDP YLAAYTSTSS TLMNGIVGTA  60
   61 PPGAMYVRAL YDYEADDRTS LSFHEGDVIQ VITQLESGWW DGVINGVRGW FPSNYCEIIN 120
  121 DVPEPEPNGF IDSVEEDPEE DDYENGFDDE EEDDDDQDLA GGLPMEQPDS DSKSGADFWI 180
  181 PQATSDGRLF YYNTMTGQTS VELPLESPTS MNESGPRDRM NVNLPDRTRP PPEMMARGLT 240
  241 QDEDEDSDAN SASELDGESI MMASQTLGSN NRAPHLKDTL SPSISMDSMN GQHPITRTRG 300
  301 DTFGATQAMN QTPMIASATS FTTFNLPSAA TIPRSFFDDG STPPLTWSRL VNNMKRSIER 360
  361 YREAIQHGSR SEYVARAEDI SDHLRLLLAA GSGTTDNHSG QPSIISTNKA LYPHFRDMMS 420
  421 KFSKLVISSH IAAADWPNQE SVQKCLSEAD GVLLGVFSYV EVARQQRGEE IPRLFPGFVI 480
  481 GSTTGGSWQN NGLAGRDPIT SNFLEDEEGV VEPTAVLDGK LLERLDELKR LLVSSIRELD 540
  541 KSLILPDKVI SPYRHEVIGN NVCLAGSRVL DTFKPWVAMI ESIDLSSLGN TFQTPQLADF 600
  601 SVNKQSLYDN ISDLILGCQA VSGPLSDEWS EVRGESLENR LEYVRQCGRT LETNSSHVGF 660
  661 SLQLLSEQVQ FNMQQQVEPR VREEPFVRQP LQRTETMPYQ PSGHLRTESR GISAPQRPGY 720
  721 AQSVSVDGAD LIAPNNKFRK IGGHSKLERI FGEDPSPQPP PVDETPEFLK LSYEDDIQWE 780
  781 TKTQPPTVKG GTLLALVEQL TRHDKLDSSF NNTFLLTYRS FTTARELFEL LVKRFGIQPP 840
  841 EGLNQQDYDV WRDRKQKLIR FRVVNILKSW FENFWMEDSS LEETKQLIRD VYTFARDTVK 900
  901 STETPGSPQL MALLDQRLTG KDVSARRMVQ NSNLPTPTPI MPKNMKKLKF LDIDVIEFAR 960
  961 QLTIIESRLY AKIKPTECLN KTWQKKQGEG EPEPAPNVKA LILHSNQMTN WVAEMILAQS1020
 1021 DVKKRVVVIR HFVAVADRCR SLNNFSTLTS IISALGTAPI ARLKRTWDIV PAKAQSTLES1080
 1081 MRKLMASTKN FGEYREALHA SNPPCIPFFG VYLTDLTFIE DGIPSIIKKT NLINFAKRAK1140
 1141 TAEVIRDIQQ YQAVVYSLQP VNELQDYILS NMSAAGDVHE MYDKSLQVEP REREDEKIVS1200
 1201 MCVTKGFSPS LGSCERPDAI CRALKRGDIL RRQTTRLVVG W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle