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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39975089, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKILLREQ DLPLPNNKQS GSGAAKKQCR RRRWATSALL TSLALMAWTH CGSGPLFAGR  60
   61 NPVQKQPQCA QVAPLRPNAT SAKLDEMDGY LKSSAFKDVS VARLSGAVRI PTVSYDDLSQ 120
  121 DVSADPRWQA MPPFVDYLAK TFPLVHEKLV LDNINTHGLL YTWQGSEKSL KPTLLMAHYD 180
  181 VVPVANETVG SWTHPPFSGH FDGHYVWGRG SMDCKNSLIG ILSAVEALLE AGFSPRRTVL 240
  241 LSFGFDEEIS GARGAGHLAP EILSRYGKDG VAILVDEGAG MKESWGTAFA LPGVAEKGYM 300
  301 DVDVVVRMPG GHSSIPLPHN GIGVMSQLIV ALEDNPYSPR LSDENPYLSL LQCGNDHGED 360
  361 FPKGLSKLLD KRGKGRGHCR KDPLAEEAAK AGAGTKYLFT TSFAPDIIHG GVKVNALPER 420
  421 TALRINYRIN VGETTEQVRD RLKHLAGKVA ARHNLTLNAF SHVPSGNVEE PEDDDEEPSS 480
  481 ITLRVRRAPL EPAPVTPTSV EGVTPYAVLS GTTRALYGEE LVVAPSLMTG NTDTRYYWDV 540
  541 TKHIFRYMPA FELGSTDDFM DGIHTVNEKA SIGAHVNGVA WFSLFIRNMD EVELD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle