YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39975373, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSTTRL FASARPSAAL RKPAMVSVRS MASVGESESK MKTFQIYRWD PSQPSEKPRM  60
   61 QTYTLDLNKT GPMVLDALVR IKNELDPTLT FRRSCREGIC GSCAMNINGT NTLACLCRIP 120
  121 TEASSEVKIY PLPHTYVVKD LVPDLTHFYK QYRSIKPYLQ RDEPAPDGKE YRQSKEDRRK 180
  181 LDGLYECILC ACCSTSCPSY WWNSEEYLGP AILLQSYRWL ADSRDQRKVE RRLALDNSMS 240
  241 LYRCHTILNC TRTCPKGLNP AKAIAEIKKE MAFV

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	274	0.97