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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39975379, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSRTPSPV PGGGWSSPGL NSGRSSPSRG VAGSTGGHSP IIWEGSRVNQ NGGSGKGGPS  60
   61 SGFRATNAGT NQRGIMGHVR RLSSGLPMWN NGKTVKSAYS NKDKGAGQKW YNPNRLPLVA 120
  121 RARRGYARMN RTAKTVLWAL VLLGLCLYVF YHSPLVYHWR RSSMLGGGEK VVIILAANIG 180
  181 GGVMEWKGAR EWAIERDSVR NKKKYAATWG YDLEIVDMST KKRYAHEWRE SWEKVDFMRS 240
  241 CMKKYPKAEW FWWLDLNTYV MEPSYSLQEH IFDNLQQHVY RDINEYNPLN ITHPPNDPFL 300
  301 DEESRSAVGD GRPESVNLIL SQDCSGFNLG SFFMRRSDWT DRLLDVWWDP VAYEQKHMEW 360
  361 AHKEQDALEQ LYVALPWVRK HTGFLPQRMI NSFPSGACSD KGPDTRIHYD QKDRDFVVNM 420
  421 AGCEWGRDCW GEMYHYRELS YYLNRTWWER FKEDLLCAIW FKLTGQKVKF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle