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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38101432, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKSKSSGG GSASASSTKV TDARFANFES DPRFRLPSKR QTKTKIDKRF AGVFKDEEFT  60
   61 KTAKVDRYGR PLSGEKHKKA LKNLYEPEDE ESGDDSDDSK EDEEGADIEV EDDEVVKRAL 120
  121 RAADKKYDPA RGGGFESSSD ESDSDSDEGD EPEVEEEEAG GASIQRFQDE QADVPLGEVT 180
  181 NRIAIVNIDW DHIKSVDLFA VFSSFVPSGG RIEKVSIFPS EFGKERMAQE EVEGPPRDIF 240
  241 KKNTEKEDED DEEDEDSEDD EKIKQELLQE GDDQDFDTDA LRSYQLDRLR YYYAIMVCSD 300
  301 KHTAETIYRE VDGREYLASS NFLDLRFVPD DVTFDDQPRD ECTGVPAGYR PVEFVTDALQ 360
  361 HSKVKLTWDT HPDEAARKDS IKRAFGGSRN EIADNDLKAY LASDSSDDEE DEPVAQGAGG 420
  421 DEEEAQPKLS KKELARRKMR EALGFKDGDE PKSSKSSGPV GGMQITFTPA LSGKPEAKEE 480
  481 EEEEVEETTI EKYKRKERER KEMKREKARA KREGRDPEAV VEAEPQETED LGFDDPFFQT 540
  541 EGGDEPSVTK SSIRKEERRK KREAREAEEK QKMEERANLE LIMADDTGDA TAAAKASSKM 600
  601 SHFDMNEILK QEKASKKKLK GKAAKKQAAK DAAAGEKNLL QNDFEMDVDD DRFKAVFDDH 660
  661 EFAIDPSNPK FKATTGMKKL LEKGRNKRKG VHDEGQDDAN QRSSKKSKAS GAVPQCYSHE 720
  721 DSPSTVNPIG FTVSTIYSVN AAFSISQSNR VNPDRQRPIG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle