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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149211203, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTPQTVAG PDSKGATVLE RHLDPGYEYT FDPATPTADG AGSSSNSFRD TPESSLRLQG  60
   61 GDIHRDLYKI AAKSKRQQLH KRAATFSNTH EHAPLIVPDL EHDDLPIQEQ MAPGGLRRQF 120
  121 LQRQARNVSY IAEPVTRNFI SFLELYGNFA GEDLEESDDE DDIAVVEEDE EEQGERRPLL 180
  181 GRRQSSKRLR QQGDASNMKS FFTLLKAFVG TGIMFLPKAF KNGGMLFSAI TLIVVSAVTM 240
  241 ICFEMLLACR KKYGGGGYGD LGQIIVGKRL RQLILISITL SQLGFVCAGL IFTAENLASF 300
  301 FDAVTPDSKP LGTNALIGVQ LVVLIPLAFI RNISKLGPAA LLADIFILIG LTYIYWFDIS 360
  361 WISKNGGFHS SIELFNPRDW TMTIGSAIFT FEGIGLILPI QSSMKQPEHF SKLLLTVMVI 420
  421 ITVVFTSVGV LCYGTFGENV SVEVITNFPQ SSKLVNAVQF LYAMAVLVGT PVQLFPAMRT 480
  481 IELKIFGRAS GRRDSLTKWK KNAFRTVLVV FSGVVAAFGA NDLDKFVALI GSFACVPLVY 540
  541 IYPAYLHYIG VAERPWVKAG DIAMMVVGLV AMVYTTIITI ASILPAHPWG IKILLFHGRS 600
  601 CNTYLVVMKS SRSIRAGLRQ AGRTSLSSRA TPPKLFPTRT TVAQHARPFH ASPARHSGSS 660
  661 NPAMAFPCLD ALESRSAQLS SSRTSASSGP EPSYTAGATL SYHCKSPLLL DWGGVLPTFH 720
  721 IAYETWGKLN ADKSNVILLH TGLSASSHAR STEANPQPGW WERFIGPGCA IDTDRYFVIC 780
  781 TNVIGGCYGS TGPSSLDPAD GKHYATRFPI LTISDMVRAQ FRLLDGLGID RLYASVGSSM 840
  841 GGMQSLAAAT LFPDRVARIV SISGCARSHP YSIAMRHTQR QVLMMDPHWN RGFYYEPDQI 900
  901 PPHAGMKLAR EIATVTYRSG PEWELRFGRR RADPNKPPAL CPDFLIETYL DHAGEKACLT 960
  961 YDANSLLYVS KAMDLFDLGA ESQRAAVQRR TAREEEMKAG KEASVNEQAA CTLTLPDVPY1020
 1021 EEQQSPEETA EAVSASPYPQ PPADLVRGLA PLSQHPTLVM GVASDILFPA WQQREVADAL1080
 1081 RAVGNRSVTH VELSEEQSMF GHDTFLLDLE NIGGNIKKFL ES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle