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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39955406, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDQRSYEGH MDWEYHNNKG PVDATSPFAQ ASQRGAKLSS FASPAPPQYP SMRPNPFSKP  60
   61 DITMTDSPFK TQAQKASQSS IFSSSLQNHP RATPFRNTAF TTPQRRVDEL ASEMSGAETS 120
  121 PALTDISEAA MDNTPEPDSR DDFGKMTITP ARAKHLFAAS PTRSTAAHIS GRGELPRPRD 180
  181 ARSHDRVRKR RRQFGDRDVG SVRPRLHADS DQSDVDVDDE DSSREGSRSG NNRRQRRRDN 240
  241 PGWLSNFLTT IHDHPNAPVI MSWWIQFAVN LSFALMGVAA FAVMGHMILA DFRYAASEAR 300
  301 SKLLAEMEAC THEYTKNRCA PKVDRLPALG VVCDEWEICM NQDPEKIKSL AISSKQMAIT 360
  361 INEFFNVLSF KAWGFILSLI IIFLLANNLG HSKFRQSMAS EVKSQQTSAP APSQHLFPPS 420
  421 QDPKQAFIWA PVTPKNLRRG IFLKDDASET DESPQSDVKA IMPSQTPSNR RSPSKGERDR 480
  481 DRDRFRAYSP SKRSPTKFY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle