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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38100419, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEGLEHKL YFRRSSRGTG AAITPANGKY QHEYLPRSTQ PFVWRQWPGV GHVEGSSPRG  60
   61 IDSLHLCQPL HQKCRGTSFN WLKACYELPA SIFLLTHGSN VQCATQPALT LYGDGHVVIH 120
  121 KGQPAMGALS LHNSLPPRRF AFLSSHLLIT AKSIYCFVKY QSKMWRRLGA GCCLASASVL 180
  181 ALTGIAQAYT LDPNSTDSVK MVSRQIADDM IDNYYFGHLP GNQPGLLPKP YYWWEGGALM 240
  241 GALIDYWYYT GDTKFNKMTT EGLLAQVGEE KDYMPAAQAF NEGNDDQGFW GVAVMAAAEY 300
  301 RFPDPPPDKP QWLALAQAVF NTQASRWDTG NCNGGLRWQV YDWNNGFDYK NTISQGCFFN 360
  361 IASRLALYTG NATYAEWADR AWDWIWGIGI IDTETWWIQD GARIPGNCTS ITPYVWTYNT 420
  421 GVLMHGVAAM YNFTTGAARQ RWAARLDKIV DMSKIFFNGT NKDVMSEVAC EPVGRCNIDQ 480
  481 QSFKAYLSRW MAATTKWAPQ TSDRIMPLLR SSAVAAAQQC TGGENGRMCG LRWIDEGRND 540
  541 GLFGLGQMMA ALEVVISVMA VNSSAPVTDN SGGTSRGDPG AGGRDIGRTR FEAFAPINSG 600
  601 DRAGAYVLTV ASLVGLFAAI AFMLLDETEK KSWPQRWSEL RLFIVHGGRS GDGAAAIAAG 660
  661 GLLRKKGPSA EEKGKAIDVV DEVHRSDSDG NGGTAIAEAN RTKNINSTRV LPIDPASVRK 720
  721 APDSGPAPEQ GAGFRRSATQ QLERAGPTSN KRNSLKKSAA PSSQRPSRVS A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle