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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38100389, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKSSGLKR LSLLGRAQNR GSSTEKKRAS MGKGGESLQQ SSEGDNEDQD QGEHDDQPEG  60
   61 PGPRTLYFNL PLPPEKLNDK GELVDTYPRN KIRTAKYTPL SFIPKNLWLQ FHNIANIYFL 120
  121 FLVILAFFPI FGSVNPGLGA VPLIFIVTVT AIKDAIEDSR RTQSDIELND STVHRLCGWN 180
  181 NINVKEDNIS LWRRFKKGNT KVFGGLWRFM ETLWSKEARV KRREKAAQVA DTPRISIDTR 240
  241 RTGRPESVIS PHTHRTSFIS AREDIPMTPV TSPLPRAEGQ QNLEVVPQQE GLASGRPSSN 300
  301 FSFRGDSAEL AHIKTDLINR TIPAEGKARF RRDKWKNLQV GDFVRIYSDD ELPADIIILA 360
  361 TSDPEGACYI ETKNLDGETN LKFRQALKCG RNMKNSRDCE RAQFIVESEP PQPNLYKYNG 420
  421 AIKWNQPIEG DASGSWREMT EPITIDNTLL RGCNLRNTDW VLGVVLFTGH HTKIMMNSGI 480
  481 TPSKRPRIAR ELNYNVLYNF FILFGMCLLS AIVNGFAFGT SDNSIALFEY GSIGPTPAMN 540
  541 GFITFWAAII LFQNLVPISL FISLELVRLL QAFFIYSDVD MYYEPIDQPC IPKSWNISDD 600
  601 LGQIEYIFSD KTGTLTQNVM EFKKATINGQ PYGEAYTEAL AGLHRRMGID VEKEAAEARV 660
  661 QIAADKEKAL AALRKIHDNP YLHDDDLQFI APDFVEDLMG ANGQEQQQAC ERFMLALALC 720
  721 HTVIPERQPG EKATMLYKAQ SPDEAALVST ARDMGFTVLS SNSDGVRLNV MGEEKYYPIL 780
  781 NTIEFNSSRK RMSAIVRMTD GQTVLFCKGA DSIIYSRLKK GEQKQLRTDT AQHLEMFARE 840
  841 GLRTLCIAER VLGEQEYQAW SKEYAVAAAA VENREDKMEA IADQIEQDLT LLGGTAIEDR 900
  901 LQDGVPQTIA VLAEAGIKLW VLTGDKVETA INIGFSCNLL NNDMELLNLK VDEDETGLTT 960
  961 REQFMAKLEA ELDKYLKIFN LTGSDEDLAA ARKIHEAPQA THAVVIDGFT LRWVLEDTLK1020
 1021 QKFLLLCKQC KSVLCCRVSP AQKAAVCAMV KNGLDVMTLS IGDGANDVAM IQEADVGVGI1080
 1081 AGVEGRQAVM SSDYAIAQFS FLQRLVLVHG RWSYRRLAES ISNFFYKNLV WAMPLFLFQI1140
 1141 YCDFDMTYLF DYTYILMFNL LFTSVPVILM GVLDQDVSDT VSLAVPQLYR RGIERLEWTQ1200
 1201 TKFWLYMLDG TYQGVMSFFI PYLVVVGSPF VTTNGLDVTD RVRFGAYIAH PAVVTINLYI1260
 1261 LINSYQWDWL IVLVVVLSDL FVFFWTGVFT SNTYSQWFYE AAPQIYAQPS FWAVFIITPV1320
 1321 MCMFPRFSIK ALQKVYWPYD VDIIREQVQQ GKFDRLQPAP VGQTLPGGRS TAGSSPSLAK1380
 1381 GNPGTFSGQD DERPIYPPSV ATHTRTQTGS DGTNYTGHRM SMEQQQLEHQ PLDQLTPMEH1440
 1441 IPTRPSIDRA RPSYDRVRAS MDRVRPSYEA SNDFTSAARL SRVESSRSRG GPPPSSHNLF1500
 1501 AGRLRGLSII SAKSRHGPDS RGGQ

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