YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ4_MAGGR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSPARAVR ALVQSQSRQR PTLERACLSC ATVVHARRCF SVLDRPPPNY PGHVPLTRVE  60
   61 RAGLAVGSGL WSLLDPRRGD LIAAFAEATA TPYFVPRLRD AMLASPTGRR ILRDRPRITS 120
  121 SSLDLPRLRS LPQGTVGATY VAWLDREGVT PDTRAHVRYV DDEECAYVLQ RYRESHDFYH 180
  181 ALTALPVVRE GEVALKAFEF ANTLLPMTGL ATFAAFTLRE GERRRFVDTY LPWAVKNGLR 240
  241 AKEIINVYWE EEMETDVVDL RKALGIEPPP DMRDARKRER DARRRRKQLE TEAQQGLDAA 300
  301 SL

Type	Start	End	Confidence
Signal Peptide	1	36	0.54
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	302	0.96