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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86196380, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAARGAFR AGARRCIGAR AIAAPARTLP VPRLAAAHAA RRSFSASAPV LSQSNTRGVV  60
   61 VQAISSVASQ REVQQYLSLF TSVESQKFAV IKVGGAILTD YLDELCQSLA FLYEVGLFPI 120
  121 IVHGAGPQLN KLLEDAGVEP QFEEGIRVTD AKTLAIARQL FLEENLNFTK KLEDYGVNVR 180
  181 PATAGVFYAD YLNKDKWGYV GKITKVNTDI IEGAINRGCL PVLTSLAWTA DGQLLNVNAD 240
  241 VAAAELARAL EPLKVVYLSE KGGLFDGDGS KISTINLDEE FDWYMGQEWC KYGTRLKIKE 300
  301 TKQLLDTLPR TSSVAIIHPR DLQKELFTDS GAGTLIRRGG KFLTATKVSE FGDLAKIKEA 360
  361 FLRDHTDDPE AKTQMENYFD YLSKDVNFKA YYDEHVRVFA VVLPPKQDGG LAKLATLTMT 420
  421 SSGWLSGVAD TIFAAIRKDH KKLVWVVDDN DENISWFQEK ADGAVNQNGK VFFFYGVQDM 480
  481 NEVVPAMNQF FKEGNATLYS EGDMAKVEQL SSGVSTSGAT RPVGRPQGQQ IRSYHTSPRR 540
  541 PTVTQPFRTS RGPAFSRSYV STTNPNPPLG KKNASNTRQA KVALIGARGY TGQALITLLN 600
  601 SHPHMELKHV SSRELAGKKL EGYNKSEIIY ENLSPEDMTD MEESGEIDCW VMALPNGVCA 660
  661 PYVNAIYQGR RGRSDALNSV IVDLSADYRF DDSWTYGLPE LVSRDSISQA KRISNPGCYA 720
  721 TGAQLAISPL LEHVGGQPWI AGVSGYSGAG TKPSRKNDTT FLADNMLPYS LTDHMHEREI 780
  781 SRQLGVDVAF VPHVAPWFSG IQLTIGIPLN KTMNSRDIRH IYQDRYAGER LVKIIGEPPF 840
  841 VKDIANKHGV EIGGFQVHSS GKRVVVCATI DNLLKGAATQ CLQNMNLALG YAEYDGIPIM 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle