YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PALI_MAGGR
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPATPLAV LLAAAFGLLL ISVLSTPIIK AIPLGEYVGV TFGVFGYCIN NNARCSPIEI  60
   61 GYDEGLAAAL ADKNANFDLP SQARRTLSTI LIIHPVAALV TLIMFAMSIA AHFHSPSHSA 120
  121 RYLLIVFIVG LLNFVICLLA FLVDVLLFVP HMAWGSYLVL AATILVALSG LVACAMRRTL 180
  181 VSRKARKKRI EENAEMSGEN FYNRQAQQVT PPAENKPTVP VVSGANGAVG DKLPSFATYE 240
  241 KRDDLSSEDR VPLTANSPAN RSPNAQYNDP NRPDGQFNQP RRAPSGRDQY GNPMEGPTDS 300
  301 YGVQRAPSAE RMNPGARGGY RGRGYGPPGR GGYGYGPPPG SRGGYGPPGR GGYGPGPNGR 360
  361 GGYGPPPRGG YGPPMRGRAP PPGYQYDRRG SPAEAYGPPP GQGPYGQRQQ SPGPPSAPGY 420
  421 GMNGSTPTVS SAAYGHQHTP SDDLPRAESP PPLPGTEPMP PVGQAVAMDA KTGSPQVPQN 480
  481 GFTAMPPPNR FGGGQQFRDS DADIQGMVGL QQGITPAGQQ PPSQRHQTLM SEPSHYSQEG 540
  541 PQYVPARQNW NDQRSKTPGA ESVIHPSMMP QPLNASRTDL SISRNSPGPG GAPARSRTSE 600
  601 YYEDVAPRFA TPDPSLRGTP VPGQAGGRIP PPINLPAGGP DFDEMPDGSR SPAASERSTF 660
  661 TSISQRGINP RWNPPPPSMM PGYGPAPQRR PNRNDMLLNS NPDFELPTNR GGRGGSPPRA 720
  721 PGTSMIPGSA YPNGRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle