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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38100160, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTPRPAKNG LGKFIKCDKT LESRLEAKLH KERSLVSSAR SAMDQERPYN GNYSSRTGSR  60
   61 ANHRTSETPT SPNDIMTPHR ASTPESPYLT ATPGAASSSN PFGDGIESRA SHRSSAGGHN 120
  121 PFGTPAMSRP ASSYESGSGI GNRFEERAQR YFHSRRVRKG EVEKPWLEKR HPKEKWVTIL 180
  181 PIIGILVGLG ISGVLVWDGI RSVVKHNYCM VLDENFSGGL RDDVWTKEVT VGGFGNGEFQ 240
  241 ETTGTDENVF VEDGVLKIKA TLQDETKIQQ DTVIDLIKDG TCTSTLVQDC IAATNTTVGN 300
  301 ATIVPPTRSA RIHTKKGATI KYGRVEVSAR MPEGDWLWPA IWMMPVDDVY GPWPRSGEID 360
  361 IAESRGNDWR YAQGGNNIAS SALHWGPNAA NNAWWRTNNK RQALKSTYSS DFNTFGLEWS 420
  421 QNYLFTYINS RLLQVMYVNF DQPLYKRGNF PEAGANGTRL QDPWTQTGRS QTPFDQRFFL 480
  481 ILNLAVGGTN GWFEDGKSGK PWLNGSPNAK KDFWEARDKW FPTWKRPQME IRSVKMWQQC 540
  541 NGNEEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle