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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39977477, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASDAAVAT LPASSPLVSA LHEGSASNMS SPLSDVEDKD GDDDLMEQLM RKNVTSIGHS  60
   61 ERGTPAQSER DDSVADDDES NLSEVDINDS EAETERLHDS PSKLKEFGGS TTPKADRTGK 120
  121 RFLNTRDRDF QFSPSKLKQQ TRAGGASDQE NDGVSDSDKD QSDSDLSTPS GHSKDALGTR 180
  181 HDNKHDTAVD GGHVSGDTST TSSSDTRKRK RSPATETVEA DQPAKKRVGS VAPAADATDD 240
  241 TTIRGSTAEA TPINTHNGDQ SDEDIPSRDH KNPHQTSKQD ANGTVARQQP SPGRSKRSTS 300
  301 RKEKQMRAGD DRDPEPAAVS PHEIPAPTTE GELPTTEEHA EAEADVDMEP GDGDGDVECD 360
  361 QDAEALHKDE EELERKKAAQ EFILGLEKSF AEFRDQYYEE RLRLLNEEEA MLMAPEPTHP 420
  421 DYLAMMRCVD ARRDDKMRII EAEYRLNQES LQRWAVAGRS QIMSQYYQDV RKTREQVLEE 480
  481 LGDEWYRIQQ QRRCHANKVA DFTLRYPESR AKAVKQVTAY NKEVSVLSEI ARHKGFPGAP 540
  541 RISGASSAEI QDDLNEIKQA KRESSHHAGA VSATFQDYGA IPNERILGPA GEEFLKQTPW 600
  601 ANPNHPSHQH QSRPREQTTP KEANGSSPHY QSGPSGGRNS HNARRAQIGH GSSAVNGTSA 660
  661 MPSSMLKSGM MAIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle