YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59802984
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADALVYHP TVSHYLKFVA TTVGRDKVLR VIQYFARFYA WYLFRTNGTP GEIAPWAAIK  60
   61 KQFGLVRKFM RVGKNVEHLR AAAVAADAKT ADPVVRYTTV GRQLGYAGYL TFDAATVLDA 120
  121 AGIRPSKNAA RLGREAFRFW AFGLTFSIVG QLYALWRLKE REARVDRKEG EGVVEGKRIA 180
  181 IERAAARTQL ISDLCDLTIP TSALGWIPFD DGIVGIAGTV SSLIGVMAQW KKTA

Type	Start	End	Confidence
Cytoplasmic	1	135	0.85
Transmembrane Helix	136	155	0.91
Non-Cytoplasmic	156	211	0.83
Transmembrane Helix	212	230	0.77
Cytoplasmic	231	234	0.77