YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMM1_MAGGR
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPDSCPVRP EPTLSFTQGL IVGQISVVFL IAAFIKFFIF GDPPSAEETA SLRASERRSR  60
   61 TLAHKKSLLS LRTSNQRPGS QQQQSVLNRK KSSILRSGPP SLTIGSILNK TYYRVESHQP 120
  121 ESLDWFNVLV AQTIAQFRSD AQHDDAILTS LTKALNGTSR PSFLDEIRVT ELSLGEDFPI 180
  181 FSNCRIIPVD EDGLDFGPGK AFDANMATRD GGTLQARMDV DLSDMITLAL ETKLLLNYPK 240
  241 KLTAVLPVAL AVSVVRFSGT LAISFIPSNP SQSTPTKMVF NFLDDYRLDF SIRSLVGSRS 300
  301 RLQDVPKIAQ LVESRLHRWF DERCVEPRFQ EIPLPSMWPR KKNARGGDDA IADVERSMSK 360
  361 AKGADVARDL RREVLVEAEA RQAAQRDSLR YRRPRADDAF PMPGSLAVDD

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.52
Transmembrane Helix	20	40	0.87
Cytoplasmic	41	242	0.55
Transmembrane Helix	243	263	0.49
Non-Cytoplasmic	264	410	0.94