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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145021222, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDHDEHVGN SGYSTPVPEL DDHRHQTASV QRADRPRRGT FDSLYGGRQL EAEHSQGGTA  60
   61 SSVRVRDFEE AIIDDEAADI SPTPFRVRRP TVESERSVSP PNSVKAFAQA RKRERGMSNS 120
  121 EPRLRNDEQE LVRTTSVASR HSYRSRQPTV RTAPGDDVSS LSTNKSAEED VCFPVQDDHM 180
  181 GDRLHIDFDF LESFIQSDYE LQQTERLERR PTHKVFSDMR PSTATHASPV VTSDGDFLEM 240
  241 PMGKTSSVNE KDDTGSGTEA AKPTPLPREV NRFNFFSSAW ESTIHAQYFG DLILPGEDIR 300
  301 GLFSFPRGET DGVWWLDVSN PTAEEVRGIC KAFGIHPLTI EDITTQETRE KIELFPSYYF 360
  361 ACFRTFEKVQ DENGDTEFEP FYVYVVVFRE GTLSFSSKSN LHASHVSKRI AALKDYVALS 420
  421 SDWICYALID DIVDSFGPVI SKLELETESV EDEVFIARSD DMHTFLRKIG VIRKNVMALM 480
  481 RLLGGKADVL KGFTKRCNEN YKVTPRMDIG LYLGDIQDHV VTMMTNLGHF EKMLSRSHGN 540
  541 YLTQLTIDNI TQGTDTNRML TKITFLASII VPLNVVTGLF GMNVHVPYQE VESLDAFFTI 600
  601 LGCLGAFVVI CLCTARKLKY I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle