YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11177520
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLCVKKL LSSSTVLSKS QFASSLFTAA SPSTLFNTNN LSPVRRAFPL SDVLDPMSAT  60
   61 RSLSQIPLAS PLSNGIGGRR GWEVNRSYST LLGLGKEEDV KAPVRKKSFT KICMVIKTFD 120
  121 NKNAEEQTYP AHQNKIRLPT KRSLFTVLRS PHVDKKSREQ FFLTTKKQHL VIQAERHELA 180
  181 KKYFWLKRHR IMGAQFEVKF FCKTRFQRAR GRDGLSDSRE SEPAPALASI

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	230	0.98