YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|631146
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLAPAWSP TTYLLLLLLL SSGLMGTQDC SFQHSPISSD FAVKIRELSD YLLQDYPVTV  60
   61 ASNLQDEELC GALWRLVLAQ RWMERLKTVA GSKMQGLLER VNTEIHFVTK CAFQPPPSCL 120
  121 RFVQTNISRL LQETSEQLVA LKPWITRQNF SRCLELQCQP GAPRPQSPGP AACGALTWPR 180
  181 PHPGEDTEAH RGESPARGCI AWTQRKLARG RSLPWAPLIP SPEWRQRQNP APAPFTQLCT 240
  241 KPLSP

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	245	0.99