YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2264400
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFRLLPSF ASLAVIVSLA LNTFAAVGPV TDLTISNANV SPDGFQRAAV VANGGVPGPL  60
   61 INGQKGDHFQ INVVNQLTNH TMLKSTSIHW HGFFQKGTNW ADGPAFVNQC PIATGHSFLY 120
  121 DFQVPDQAGT FWYHSHLSTQ YCDGLRGPFV VYDPNDPHAS LYDVDNEDTV ITLADWYHVA 180
  181 AKLGPAFPPR ADATLINGLG RSTDTPTADL AVIKVTSGKR YRFRLASLSC DPAFTFSIDN 240
  241 HDMTIIEADA VNTQPLEVDS LQIFAGQRYS FVLEANQAVD NYWVRANPFF GTTGFAGGIN 300
  301 SAILRYDGAA EVEPTTTQST STKPLAETDL VPLASMPVPG SPVSGGVDKA INFAFTFNGT 360
  361 NFFVNGATFT PPSTPVLLQI MSGAQDASAL LPSGDVYSLP SNATIELTFP ATTGAPGAPH 420
  421 PFHLHGHTFA VVRSAGSTKY NYDNPIWRDV VSTGTPAAGD NVTIRFRTDN PGPWFLHCHI 480
  481 DFHLEAGFAV VMAEDIPDTK LANPVPQAWS DLCPIYDALD PSDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle