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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2245570
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGILPTYQR FVNGVPVPSI SRRSFRLREK YLIVSVLLTF GIVWLGALFY LPEFKSSNSV  60
   61 NDSVYNVYKR IQKAGPELLM PPPLAQNDVG DFPVIGIAHH GEGGDDPHVI EDRNRLRAKI 120
  121 EEDMGMKVLE RPQFDVAPSV SSSRGPSKPP VDAIEEPAVG NNAANKDVSP SGPKAESSDK 180
  181 FVAVALAPGA DPEIKHKLET VKKMMLHAWY NYKLYAWGKN ELKPMSKRAH LSSVFGAGEL 240
  241 GATIVDGLDT LYLMGLNDEF REGRDWVAEH LHINEIDSDL SVFETTIRFV GGLLSCYALT 300
  301 GDTMFRDKAA EVGDALLPAF DTPTGLPYAL INPSTKASRQ YHWAGPNSIL SELGTLHLEF 360
  361 TYLSDVTGRD IYRQKVSRIR EVLDQIDKPG DLYPNFINPR TGQWGQRHMS LGALGDSFYE 420
  421 YLLKAWLMSG GADEQARIMF DTAMQAALDK MLRVSPSGLA YLAELKYGRI IEEKMDHLSC 480
  481 FAGGMFALAS TTLDNSMSER YMDVAKKLTN TCHESYARSE TKLGPEAFRF SNAAEARAQK 540
  541 SNEKVYLLRP ETFESYFIMW RLTKQQMYRD WAWEAVQALE KHCRVEGGYT GLVNVYHANP 600
  601 QGDDVQQSFF LAETLKYLYL IFGDDSFLPL DEWVFNTEAH PFPIRGKNPL YRAVDKPVLP 660
  661 EPAHAQNNRI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle