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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2246450
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVRRRSEEP VYPSKVFAAD EKPLKPHKKQ QQQQEDKNTL LIDASDALPL PLYLTNGLFF  60
   61 TMFFSVMYFL LSRWREKIRN STPLHVVTLS ELGAIVSLIA SVIYLLGFFG IGFVQTFVSR 120
  121 GNNDSWDEND EEFLLKEDSR CGPATTLGCA VPAPPARQIA PMAPPQPSMS MVEKPAPLIT 180
  181 SASSEEDEEI IKSVVQGKIP SYSLESKLGD CKRAASIRKE VMQRITGKSL EGLPLEGFNY 240
  241 ESILGQCCEM PIGYVQIPVG IAGPLLLNGK EFSVPMATTE GCLVASTNRG CKAIYASGGA 300
  301 TCILLRDGMT RAPCVRFGTA KRAAELKFFV EDPIKFETLA NVFNQSSRFA RLQRIQCAIA 360
  361 GKNLYMRFVC STGDAMGMNM VSKGVQNVLD YLQNEYPDMD VIGISGNFCS DKKPAAVNWI 420
  421 EGRGKSVVCE AIITEEVVKK VLKTEVAALV ELNMLKNLTG SAMAGALGGF NAHASNIVSA 480
  481 VFIATGQDPA QNIESSHCIT MMEAVNDGKD LHISVTMPSI EVGTVGGGTQ LASQSACLNL 540
  541 LGVKGANREA PGSNARLLAT VVAGSVLAGE LSLMSAISSG QLVNSHMKYN RSTKDVTKAS 600
  601 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle