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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494413
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYINILL FTLPLNILVN GQGHYSSTKH PISSTKSSKY HRSLCECEIY TSIYDNDPEM  60
   61 KKVMQDFDQQ TSQRLREYDE RLIKNRQKCK DQCDKDIQKI ILKDKIEKEL TKQLEALEVD 120
  121 ITTEDIPACV CKKSVEDKVG KNCLKCGGIL GGGIPGLGVL GAYAVNSMVQ VAMDAAKKAA 180
  181 IAEGAEAGIA EGIKVAIQGV PKKFLLYTLN GKELQAVINA NNFQNPSFFY GEIMAEYVSW 240
  241 KKSDMVNSYG LFSFIEESCE NNPDKIMKFI LANSNDIAKD AGKAATKMTT QTTEALTLKK 300
  301 TAEATSTSAI FSNPIVISFI VLVIIVLILL IIYLILRYRR KRKMKKKLQY LKLLKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle