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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2209107
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLGFFFGRI SYDAGIGFLQ HMQSNHRKVV TWISDFGFFD KENHPKLYDL TKKQLISKMD  60
   61 SSYNYDTSPL EFNSWLVFRH FVDLILMCDF CSYILMGLAW TCWPKVNIIL QFLRIFGGIA 120
  121 LIVFNYWVKM DAHRVVRDYA WYWGDFFFLL RSSLVFNGVF ELAPHPMYSV GYAGYYGMSL 180
  181 LTGSYAVLFA SILAHAAQFG FLLFVENPHI ERTYGTDINH ARLSPRGEDN EFELPPEHDL 240
  241 VGFVNFDFTR ISDVALLIIA LYSIFIILLS SNSHYSQFWA IFQAFVWRFL HSIIHAFILF 300
  301 YQSKSKAWTK HFIRNGESAA YAWSQWKGLY NLTLNMSYIS FVMAAWKLYH LPSNWTYGLV 360
  361 SLRHALGFGL IALHIYTSVS IYEDLGQYGW FYGDFFLPSR SPKLVYQGIY RYVNNPERFL 420
  421 GCSAYWGLAL ISSSAWIFLI AILAQLSNLA IIRLVEQPHM QKVYGNTLRK EAGISKLIKQ 480
  481 ATSEKGNILP KTVETHMKAL TTSVDKVLDQ TAEALEEFVN TAPPKVQELL KGTESNLRKN 540
  541 AQLAILKLFA PQLSSSTHFD YKLEIKGIDN NQVLLGHPIT VCWTASPNHE INDWIGLYKL 600
  601 SDNASDLYTQ TSSEGRWSAI DANGYTSHCS SIKSLSNDKN SGEVEFSGDL LFWETGTFEF 660
  661 RYHYGGKHLV MAKTEPFVIT ATSMNTTDVD EVSAYLLKSI KFCDPNITPH DGDASLCDIS 720
  721 EGSARKLTSI IKYSFGIDLS YRVVQVDGSC SALSRRIVNS LKILQSFDGP SGAKDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle