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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494463, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRLCALLI LYMLLNRHSV KCATTASSGL QSGVPNGHGV SSEQNASSRG QGNDTSGGPS  60
   61 GSSNSGQQSV AEGTGTHTDQ QGRAGGTNVA AQVSPGSQNS QVQSGSPPST PSGSQNGGSV 120
  121 TSTTLNPQPT TLQVASPTEV AATPSESFTN PIQVKASLLR DQKGLKITGP CKSYFQVYLV 180
  181 PYLYLNVNAK ESEIEMDPMF MKVDDKIKFE KEKHLLNNIC EDNKTFKLVV YMYEGELTIK 240
  241 WKVYPPKGET SSDKTLDIRK YKMKDIGQPI TSMQVVVMSE LNKTIYMESK NFSVMNQIPE 300
  301 KCDAIANECF LSGVLDVQKC YHCTLLLQKK ENAEECFKFV SPTIKNRFED IQTKGEDEEN 360
  361 PNVVELEETI DLLLNKIYKN GEGESNEVDQ LAIIDSSFQS DLLKYCSLMK EVDTSGSLDN 420
  421 HQLGDAEDVF ANLTHLLQSN SDHDVPSLKN KLKSPAICLK NVGHWVGSKT GLVLPTLEYS 480
  481 TSQDNAESFD EGEEDTSNST TTQSADVHPL NVSDKLFCND DYCDRAKDSS SCMAKIEAGD 540
  541 QGDCSNSWLF ASKVHLEAIK CMKGYDHGAS SALYVANCSG KEANDKCHVA SNPLEFLNTL 600
  601 EETKFLPTES DLPYSYKEVN NVCPQPKSHW QNLWADVKLL DPQNEPNSLS TKGYTAYQSD 660
  661 YFKGNLDAFI ELVKSEVMKK GSVIAYVKAA GALSYDFNGK KVQSLCGGET PDLAVNIVGY 720
  721 GNYITAEGQK KSYWLLQNNW GKHWGDDGTF KVDMHGPDHC QHNFVHSAAF FNLDIPVVVP 780
  781 APSSEPEIND YYMKNSPDFF SNFYFNKYEA EKANGLGDEK GAIHNTVLYG QSGKETSAPS 840
  841 VSVGDQSGKV VAQAAEGLAA DGGKAGGGGS GTGQVGEAGV GSREGAGAGP GPTESRPAGP 900
  901 AERGGTGARG GAEQKLPAET LPSASPTQPG VVTVTGVINS VNGAPGNNGP NTAGEQGSPA 960
  961 ARGAAPPAEA SPTVEKPKSI DLTGVISEGI TGVFHFLKNV KKGKVSSNFV TYDNTKAIGD1020
 1021 KACSRVQSSD VDKLDDCVKF CEANWDACKS KVSPGYCLTK KKGNNDCFFC FV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle