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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494462, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRLCALLI LYMLLNGHSV KCTAAVGQGQ GTGVSTDQGV SSQHTANSAG QGIGSSTGST  60
   61 GVPQSRPQSG GGDTGTQGGQ QDRASGTSAT HVPVVPQNGH VQSNPPPSTS SGGPNGGGGA 120
  121 SITQNVQQAN LQAGSDTQVA ATPSESFTNP IQVKASLLRD QKGLKITGPC KSYFQVYLVP 180
  181 YLYLNVNAKE SEIEMDPMFM KVDDKIKFEK EKHLLNNICE DNKTFKLVVY MYEGELTIKW 240
  241 KVYPPKGETS SDKTLDIRKY KMKDIGQPIT SMQVVVMSEL NKTIYMESKN FAVMNQIPEK 300
  301 CDAIANECFL SGVLDVQKCY HCTLLLQKKE NAEECFKFVS PTIKNRFEDI QTKGEDEENP 360
  361 NVVELEETID LLLNKIYKNG EGESNEVDQL AIIDSSFQSD LLKYCSLMKE VDTSGSLDNH 420
  421 QLGDAEDVFA NLTHLLQSNS DHDVPSLKNK LKSPAICLKN VGHWVGSKTG LVLPTLEYST 480
  481 SQDNAESFDE GEEDTSNSTT TQSADVHPLN VSDKLFCNDE YCDRAKDSSS CIAKIEAGDQ 540
  541 GDCSTSWLFA SKVHLEAIKC MKGHDHVASS ALYVANCSGK EANDKCHAAS NPLEFLNTLE 600
  601 ETKFLAAESD LPYSYKAVNN ACPEPKSHWK NLWENVKLLD PTNEPNSVST KGYTAYQSDH 660
  661 FKGNMDAFIK LVKSEVMKKG SAIAYVKAQG ALSYDLNGKK VQSLCGGETP DLAVNIVGYG 720
  721 NYITAEGQKK SYWLLQNSWG KHWGDDGNFK VDMHGPDHCQ NNFIHTAAVF NLDVPVVAPA 780
  781 PSSDPEINDY YMKNSPDFFS NFYFNKYEAE KANGLGEEKG PVNNSVLYGQ SGEETSALPA 840
  841 SVGDQSGKVV AQTAEGLGAQ QGSGGGLGAA AGPTGQEGVG VAAPGGRGTG GEAIAAAAVV 900
  901 VVGGGGSGSA GERGTGVGVA PGVGAAGRSV GEGQQLPAGA ASPGTGTQHV GGSVSGGTNS 960
  961 GNGATGNSGP NTQRGQVSQT VNEAAPSTVE KPKSIDSTGV ISEGITGVFH FLKNVKKGKV1020
 1021 SSNFVTYDNT KAIGDKACSR VQSSDVDKLD DCVKFCEANW NECKGKVSPG YCLTKKKGNN1080
 1081 DCFFCFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle