YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494459, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRVCFAWA MCALIGAEVG AKVAEEGLRT GLAPPQNAGS NHTGAKRLPL DRGSDRCVSP  60
   61 QFSSHIEADA PPRSADDAAG RGQPPQQVEH PPNRVTNVMA PPMSKQSAVE VRSALLKNHD 120
  121 GVKITGTCNA KVQLFLVPHI SISVEAESNT IQLGRKLEDV TITKEFYRGV GGKSSPLLQF 180
  181 EEDADSLLNQ CAEGKTFKFV VVIRGEELIL KWKVYEKVPS PSDNNKVDVR KYLLKNLGRP 240
  241 ITAIQVHSGK EESDVFLLES KAYLLRQDIP RTCERIASSC FLSGNVDIEG CYKCTLLSED 300
  301 TKLGSPCFSY LPPEVKHNYE KVKMKAQDEG DLGEAQLEEL IRRILHAVQR KGKSNPPRKG 360
  361 ATEEDYPNDN LRELLLRYCQ VMKKVDRSGT LEEHEVGNEM DVLANLEGLL RKHPKEEIPA 420
  421 LREKLKNPAI CMKDAAKWVE QKRGLALPLF EYKHLQRRVT TAVDSQESNS ADKENIIKGE 480
  481 HIAAYRAVID LSQRDQMNHS NLSGEMFCNE DYCDRWKDKS SCFSSIETEE QGNCNLSWLF 540
  541 TSKTHLETIR CMKGYDHLGS SALYVASCSK RGKKSRCVSG SNPYEFLTIV EESGFLPPAV 600
  601 WLPYSYGDVG NGCPKREDHW HNLWEGVKLL EPADEPNSVS TKGYTSYESD DFRGDIQTFV 660
  661 NMVKSQVRSK GSVMAYIKVL DILSYDFNGK EVHTLCGDKR PDHAVNIIGY GNYVTPEGVK 720
  721 KSYWLMRNSW GKYWGDGGNF KVDTHGPPGC QHNFIHTAAV FNLSMPMAEG PSKGEAHLYD 780
  781 YYLKSSPDFL GNIYHKISGR RSGAVEKGRT TGNQSLTVQG QEGWSDLLEG TTPSTTANPN 840
  841 PVGELKGAQD VPKRGNTGKR ISEDPQEEVL NEELIPQLPL APISQAAATL GEGQVEATPL 900
  901 PPLTVAASLP LRGDVLLERD GTNEGSKEAA TVEVMHILKY IKNGKVKLGI ATYRDDSDIA 960
  961 GDHSCSRSLA QNSEQLAECI QFCHDEWPNC RGEASPGYCL AQRRRTGDCF FCYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle