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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1381091, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVPMLVLMC AYWVCTEGVV KCEQEGGGSG TSDSSGGDPQ TSPKGGEAAS SAHGSQGSKE  60
   61 SVTPGGSHAQ QEAAAPEKTL VPQESPAKEG GAPPSVPENQ AHSPQTPGGP PPTASNIIGT 120
  121 GVSNNGSPPH AAATPGGDNP KQEEATTALK PIQVKSALLK DHKGVKVTGP CDATFQVYLV 180
  181 PYLYIDVNAK NTEIEMDPMF TKVDNKIKFE EGKHRLMNIC EKGKTFKLVV YMYEDVLTIK 240
  241 WKVYAPKGVP ADKTLDVRKY KMRDIGRPIT SIQVLATSKN DETVLVESKN YSVMEEIPEK 300
  301 CDAIANECFL SGVLDVQKCY HCTLLLEKKE NAQECFKFIS PEIRDRFDDI KTKGEDEEDP 360
  361 NEAELEESIH TILEKMYQNG GANNEVNHLA ILDDTLKEEI QNYCAMMKEM DTTGVLENYE 420
  421 MGNADDVFGN IAKMMGKNGN YSVSSLPNKM KNAAICLKSP DDWVEGKTGL MLPNLVPPYL 480
  481 VHNNVEDVTT SLETSSDGTT AFKQDDDGTI DLTNLDCVDV HPSVLADKMH CNDDYCDRAK 540
  541 DTSSCMAKIE VEDQGDCATS WLFASKMHLE TIKCMKGYDH VASSALYVAN CSDKEESDKC 600
  601 QAASNPLEFL DILEETKFLP AESDLPYSYK QMGNACPEPK SYWQNLWADV KLLEKQYEPN 660
  661 AVSTKGYTAY QSDHFMANMD AFIKMVKSEV MKKGSAIAYV KAAGVMTHDM NGVDVHSLCG 720
  721 GETPDLAVNI VGYGNYISPE GVKKSYWLMR NSWGKYWGDD GTFKVDMHGP PGCQHNFIHT 780
  781 AAVFNLDMPL ATHSINKDPE ISDYYLKNSS DYYENLYYKK FQGSGATGGA GKQWVQGAST 840
  841 VYGQEGDPKV ADEAGGEAAQ SITTHSRAEP AGDAPPSGPP HAGTDSEQGE GTGPTDGEGP 900
  901 TRVVDEKAQA GGPLTSPGTL QDAVAPGGPQ GPPEQGSPGS PGPQETPGPQ GPPVQQGSPG 960
  961 PQLPPVQPTA PVPPVLPVPP VLPVPPAAPL PGAPTNSTVP TTESEVKEVL HILKHIKKGK1020
 1021 VKVGLVTYDT EKVIGAEKVC SRAYAVDHEK QEECVEFCEA NWDACKGKVS PGYCLTKKRG1080
 1081 SNDCFFCFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle