YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10764631
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVALGGAGTR QNNWPPLPSF CPVQPCFFQD ISMEIPQEFQ KTVSTMYYLW MCSTLALLLN  60
   61 FFACLARFCV DTGSGSGFGL SMLWLLLFTP CSFVCWYRPM YKAFRSDSSF NFFVFFFIFF 120
  121 VQDVFFVLQA IGIPGWGFSG WVSALVVVGS NPAVAVLMLL VALLFTGIAV LGIVMLKRIH 180
  181 SLYRQTGASF QKAQQEFAAG VFSNPAVRTA AANAAAGAAE NAFRAP

Type	Start	End	Confidence
Cytoplasmic	1	46	0.97
Transmembrane Helix	47	69	0.92
Non-Cytoplasmic	70	76	0.84
Transmembrane Helix	77	97	0.93
Cytoplasmic	98	109	0.86
Transmembrane Helix	110	133	0.91
Non-Cytoplasmic	134	152	0.89
Transmembrane Helix	153	176	0.92
Cytoplasmic	177	226	0.96