YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LOLA_AZOVD
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFRVLLLS AVAFALSPAQ ADERSIQRLT QLLDRAQTLT ARFSQLSLDG SGTQLQETSG  60
   61 EMALKRPGLF RWHTDAPQEQ LLVSNGKTVW LYDPDLEQVT VRSLDQRLTH TPALLLSGDL 120
  121 SKIGENFEIT HKEAGGVVDF ILKPKSKDTL FDNLRLSFRD GVVNDMQLID GVGQRTNILF 180
  181 FGVKMNQSLD AAQFDFKVPE GTDVIQE

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	207	0.99