YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23102898
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRSALLLLL YLLTDIAWAS QPASGTFVAG QSCEAYQSFR KKTNPGAVKT EPGREYRIRE  60
   61 IDERDYQWLR IEMPGNAEPL RWVPADCGDA GALEPASSAR RERPQQSAGV CQTPGLQDSY 120
  121 VLAITWQPGF CEHKLAKSKS KQKPECRAME SGELNIANFT LHGLWPNKKE CGKNYGNCSR 180
  181 TDIQLSEETL SYIKPWMPNF YFENDFGNYE WKKHGTCQTD MDDDAYFRKA VTAVRTVNDS 240
  241 ELGQYIRANI GKNVERRTLQ EILRRTHPDA PDSFAFLCTD NRLHEIQVHL PVDFREGPTL 300
  301 AGLIGPRPSR THGPTPGECS QERILIERSG R

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	331	0.99