YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67154650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWTWFHKLG SPKWFYEISG RWLPWFAVAA VLLLGVGLVW GLAFAPPDYQ QGNSFRIIYI  60
   61 HVPVAFLAQS CYVLLAVAGA IGLVWRMKLA DIALQCAAPI GAWMTFVALV TGAIWGKPTW 120
  121 GTWWVWDARL TSMLILLFLY FGIIALGQAI ANRDSAAKAC AVLAIVGVVN IPIIKYSVEW 180
  181 WNSLHQPATF TLTEKPAMPM EMWLPMLVMV LGIYCFFAAV LLLRMRLEVL RREARSNWAK 240
  241 SEIKALLGAP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	44	0.94
Non-Cytoplasmic	45	63	0.85
Transmembrane Helix	64	85	0.92
Cytoplasmic	86	92	0.88
Transmembrane Helix	93	115	0.90
Non-Cytoplasmic	116	127	0.82
Transmembrane Helix	128	150	0.86
Cytoplasmic	151	158	0.74
Transmembrane Helix	159	178	0.91
Non-Cytoplasmic	179	202	0.95
Transmembrane Helix	203	225	0.90
Cytoplasmic	226	250	0.98