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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67155128, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSIGVIAL AALAYMATLF AIAFYGDRRS APLPPRMRAW VYSLSLAVYC TSWTFFGAVG  60
   61 QATEQLWDFL PIYLGPILLL LFAPWMLQKM VMISKQENIT SIADFIAARY GKSQPLAVVV 120
  121 TLICLVGVLP YIALQLKGIV LGVNLLIGAG PDSTGTRAQD TAMVVTLCLA LFTILFGTRT 180
  181 LDVTEHHRGM MLAIAFESLV KLLAFLAVGA YITYGLYDGF DHLLEEARTA PQLAEFWSKD 240
  241 TNWPALLVQT GVAMMAIVCL PRQFHVTVVE NIEPQDLRLA RWVFPLYLFL AALFVVPIAL 300
  301 AGQLRLPAGI IPDTFVISLP LAEHSPVLAL LAFIGGASAA TGMVIVASVA LSTMVSNDIM 360
  361 LPWLLRRKNA ERPFEAFRHW MLSVRRVSII GILLMAYVIY RLLGPTTSLA TIGQLAFAAI 420
  421 SQLTPAMLGA LYWKQANRRG VFAGLAVGAL LWSYTLVLPL IAQRVGWPLG QFPGLEWLAS 480
  481 RPLGLPITSI TLGMLISLAG NWAVFAAVSM LSRTRVSEHW QASRFVGQEI NRRSGGRSLL 540
  541 AVQIQDLLEL AARFVGEEHA RRRFERFAQR QGKEFNPNQA ATSEWIDHTE RLLAGVLGAS 600
  601 STRAVVKAAI EGREMQVEDV VRIVDEASEV LQFNRALLQG AIENITQGIS VIDGSLRLVA 660
  661 WNRRYLELFN YPEGLIYVGR PIADLIRYNA ERGLLGLGDV EEHVSKRLYW MRLGTPHTFE 720
  721 RLFPNGRVIE LIGNPMPGGG FVTSFTDITE FREAERALKE ANEGLEQRVI ERTRELSKLN 780
  781 QALVEAKAHA ESANQSKTRF LAAVSHDLMQ PLNAARLFAA SLAHQEPPLP PEAQRLVQHL 840
  841 DCSLRSAEDL ITDLLDISRL ESGRITPERT NFPIADLFDT LGAEFKALAR EQGIDFHLRS 900
  901 SKLRINSDMK LLRRVLQNFL TNAFRYAKGH VLLGVRRQGD QLRLEVWDRG PGIPEDKRQE 960
  961 IFEEFKRLDS HQTRAEKGLG LGLAIADGLC RVLNHRLEVR SWLGKGSVFS VTVPLARTVA1020
 1021 PVVSAKSDGT QPLNTHALTG AQVLCVDNED SILTAMHSLL SRWGCQVWTA RNRLECEQLL1080
 1081 EGELRPQVAL VDYHLDQGET GTDLMAWLRT RLGKPLPGVV ISADARPETV AKIHATGLDY1140
 1141 LGKPVKPAAL RALLNRHLAL R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle