YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10644497
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VCSTMAVTSW IIGFLLALIH LVLLLPLPFC VSQKVNHFFC EITAILKLAC ADTHLNETMV  60
   61 LAGAVSVLLG PFSSIVVSYA CIFGAILRIQ SGEGQRKAFS TCSSHLCVVG LFYGTAIVMY 120
  121 VGPRHGSPKE QKK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.88
Transmembrane Helix	7	29	0.89
Non-Cytoplasmic	30	63	0.86
Transmembrane Helix	64	87	0.87
Cytoplasmic	88	100	0.79
Transmembrane Helix	101	121	0.87
Non-Cytoplasmic	122	133	0.86