YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10957124
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAHELFRYF RMPELVDFRQ YVRTLPTNTL MGFGAFAALT TFWYATRPRA LKPPCDLSMQ  60
   61 SVEVAGSGGA RRSTLLDSDE PLVCFYEDVT TLYEGFQRGI HVSNNGPCLG SRKPDQPYEW 120
  121 LSYKQVAELS ECIGSALLQK GFKAAPDQFV GIFAQNRPEW VIIEQGCFAY SMVIVPLYDT 180
  181 LGSEAITYIL NKAELSLVFV DKPEKAKLLL EGVENKLTPG LKIIVLMDAY GSELVERGKK 240
  241 CGVEVISMKA MEDLGRANRQ KPKPPAPEDL AVVCFTSGTT GNPKGALITH RNVVSDCSAF 300
  301 VKMTEKVLAL NASDTHISFL PLAHMYEQLM LCVMLCHGAK IGFFQGDIRL LMDDLKVLQP 360
  361 TVFPVVPRLL NRMFDRIFGQ ANTTLKRWLL DFASKRKEAE LRSGIIRNNS LWDKLIFRKI 420
  421 QSSLGGRVRL MVTGAAPVSA TVLTFLRAAL GCQFYEGYGQ TECTAGCCLT MPGDWTAGHV 480
  481 GAPMPCNLIK LVDVEEMNYI AAKGEGEVCV KGPNVFQGYL KDPAKTAEAL DKDGWLHTGD 540
  541 IGKWLPNGTL KIIDRKKHIF KLAQGEYIAP EKIENIYLRS EPVAQVFVHG ESLQAFLIAI 600
  601 VVPDIETLCS WARKRGLDGS FEELCRNKDV KKAILEDMVR LGKDSGLKPF EQVKGIALHP 660
  661 ELFSIDNGLL TPTMKAKRPE LRNYFRSQID ELYSTIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle