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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3V1_CROAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTIS LAVFPYQGSS VILESGNVND YEVVYPRKVT ALPKGAVQPK YEDAMQYEFK  60
   61 VNGEPVVLHL EKNKGLFSED YSETHYSPDG REITTYPPVE DHCYYHGRIE NDADSTASIS 120
  121 ACNGLKGHFK LQGEMYLIEP LKLPDSEAHA VFKYENVEKE DEAPKMCGVT QNWESYEPIK 180
  181 KASQSNLTPE QQRYLNAKKY VKLFLVADYI MYLKYGRNLT AVRTRMYDIV NVITPIYHRM 240
  241 NIHVALVGLE IWSNTDKIIV QSSADVTLDL FAKWRATDLL SRKSHDNAQL LTGINFNGPT 300
  301 AGLGYLGGIC NTMYSAGIVQ DHSKIHHLVA IAMAHEMGHN LGMDHDKDTC TCGTRPCVMA 360
  361 GALSCEASFL FSDCSQKDHR EFLIKNMPQC ILKKPLKTDV VSPAVCGNYF VEVGEECDCG 420
  421 SPRTCRDPCC DATTCKLRQG AQCAEGLCCD QCRFKGAGTE CRAAKDECDM ADVCTGRSAE 480
  481 CTDRFQRNGQ PCKNNNGYCY NGKCPIMADQ CIALFGPGAT VSQDACFQFN REGNHYGYCR 540
  541 KEQNTKIACE PQDVKCGRLY CFPNSPENKN PCNIYYSPND EDKGMVLPGT KCADRKACSN 600
  601 GQCVDVTTPY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle