YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2072027
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLWSVDKDKA WSNDWRALAA ALLISCIGIL IRSVFRVVEL SEGFQGHLAT SEAFFYASGY  60
   61 SVYGHRYLYS LLARPNSCIS TQPNEQKARE MEKEGVTRIE

Type	Start	End	Confidence
Cytoplasmic	1	14	0.77
Transmembrane Helix	15	35	0.89
Non-Cytoplasmic	36	47	0.69
Transmembrane Helix	48	64	0.42
Cytoplasmic	65	100	0.53